{"id":206,"date":"2016-04-06T16:31:56","date_gmt":"2016-04-06T14:31:56","guid":{"rendered":"https:\/\/www.genoscreen.fr\/metatranscriptomics-analysis-enzymatic-functions-metabolic-pathways\/"},"modified":"2026-06-06T15:04:15","modified_gmt":"2026-06-06T13:04:15","slug":"metatranscriptomics","status":"publish","type":"page","link":"https:\/\/www.genoscreen.fr\/en\/genoscreen-expertise\/metatranscriptomics\/","title":{"rendered":"Metatranscriptomics &#8211; An analysis of enzymatic functions and metabolic pathways"},"content":{"rendered":"\n<p class=\"intro wp-block-paragraph\">The <strong>metatranscriptome <\/strong>corresponds to the <strong>whole set of genes and functions expressed<\/strong> (i.e. the transcriptomes) by the <strong>microorganisms <\/strong>in a sample.<\/p>\n\n<h2 class=\"wp-block-heading\">Applications<\/h2>\n\n<p class=\"wp-block-paragraph\">Metatranscriptomics opens up many fields of analysis:<\/p>\n\n<ul class=\"wp-block-list\">\n<li>The <strong>identification <\/strong>of <strong>expressed enzyme functions<\/strong> and <strong>metabolic pathways<\/strong>.<\/li>\n\n\n\n<li><strong>Comparisons of gene expression levels<\/strong> between samples or experimental conditions.<\/li>\n\n\n\n<li>The <strong>identification of microorganisms<\/strong> involved in the expression of metabolic pathways of interest.<\/li>\n<\/ul>\n\n<h2 class=\"wp-block-heading\">GenoScreen &#8211; Services provided<\/h2>\n\n<p class=\"wp-block-paragraph\">The GenoScreen teams can investigate the initial matrix by <strong>extracting all the RNA produced by the microorganisms<\/strong> present in the sample.<\/p>\n\n<p class=\"wp-block-paragraph\">The library preparation methods are then adapted to match the research objectives and the nature of the initial matrix:<\/p>\n\n<ul class=\"wp-block-list\">\n<li>For <strong>eukaryotes<\/strong>\n<ul class=\"wp-block-list\">\n<li>Specific <strong>enrichment <\/strong>of poly(A) <strong>mRNA<\/strong>.<\/li>\n<\/ul>\n<\/li>\n\n\n\n<li>For <strong>bacteria<\/strong>\n<ul class=\"wp-block-list\">\n<li><strong>Removal <\/strong>of eukaryotic poly(A) <strong>mRNA<\/strong>.<\/li>\n\n\n\n<li><strong>Subtraction <\/strong>of very strongly expressed <strong>ribosomal RNA<\/strong>.<\/li>\n<\/ul>\n<\/li>\n<\/ul>\n\n<h2 class=\"wp-block-heading\">GenoScreen&#8217;s assets<\/h2>\n\n<ul class=\"wp-block-list\">\n<li><strong>Full project support<\/strong>, from the collection of the initial samples to the preparation of RNA-Seq libraries.<\/li>\n\n\n\n<li><strong>Customized sequencing strategies<\/strong> (depending on the number of samples and the sequence length, etc.).<\/li>\n\n\n\n<li><strong>15 years of expertise<\/strong> in RNA analysis.<\/li>\n\n\n\n<li>Expertise in <strong>transcriptomics<\/strong>.<\/li>\n<\/ul>\n\n<div class=\"wp-block-buttons is-content-justification-center is-layout-flex wp-container-core-buttons-is-layout-04478499 wp-block-buttons-is-layout-flex\" style=\"margin-top:20px;margin-bottom:20px\">\n<div class=\"wp-block-button\"><a class=\"wp-block-button__link has-elementor-28-fc-130-color has-elementor-primary-background-color has-text-color has-background has-link-color wp-element-button\" href=\"https:\/\/www.genoscreen.fr\/en\/genomic-services\/request-a-quote-genomic-analysis\" style=\"border-top-left-radius:0px;border-top-right-radius:0px;border-bottom-left-radius:0px;border-bottom-right-radius:0px\">Request a quote<\/a><\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>The metatranscriptome corresponds to the whole set of genes and functions expressed (i.e. the transcriptomes) by the microorganisms in a sample. Applications Metatranscriptomics opens up many fields of analysis: GenoScreen &#8211; Services provided The GenoScreen teams can investigate the initial matrix by extracting all the RNA produced by the microorganisms present in the sample. The [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":2402,"parent":2374,"menu_order":6,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"page-categories":[159],"class_list":["post-206","page","type-page","status-publish","has-post-thumbnail","hentry","page-categories-genoscreen-expertise"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.1 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Metatranscriptomics - An analysis of enzymatic functions and metabolic pathways - GenoScreen<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.genoscreen.fr\/en\/genoscreen-expertise\/metatranscriptomics\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Metatranscriptomics - An analysis of enzymatic functions and metabolic pathways - GenoScreen\" \/>\n<meta property=\"og:description\" content=\"The metatranscriptome corresponds to the whole set of genes and functions expressed (i.e. the transcriptomes) by the microorganisms in a sample. 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